Software

Click here to see a list of programs developed by the partners of the platform.

Assemble 2: Study and construct RNA 3D architectures interactively.DOI: 10.1093/bioinformatics/btq321
MACSIMS: Multiple Alignment of Complete Sequences Information Management System.DOI:
 10.1186/1471-2105-7-318
Rapid detection of orthology and inparalogy relations.DOI: 10.1093/nar/gky1068
Quality control systems for ChIP-seq and enrichment-related datasets.DOI: 10.1093/nar/gkt829
Comprehensive workflow for annotating and ranking SNVs and indels from next generation sequencing data.DOI: 10.7717/peerj.796
MS/MS spectra viewer/extractor designed to extract “high quality” spectra from peaklist files.DOI: 10.1002/pmic.201300415
Data integration framework and software suite for mass spectrometry based proteomicshttp://www.profiproteomics.fr/proline/
AnnotSV: An integrated tool for Structural Variations annotation.DOI: 10.1093/bioinformatics/bty304
Mychem is a chemoinformatics extension for MySQL and MariaDB.https://mychem.github.io/
Highlight protein divergences between speciesDOI: 10.1093/gbe/evaa248
A prediction tool to reveal disease-relevant deleterious missense variants.DOI: 10.1371/journal.pone.0236962